Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs34766020 | chr10:70654754 | A/G | 7.37E-9 | 214 | 15.2 | 16.97 | 10.6 | KM Plot |
| KIRP | rs34785904 | chr10:70656975 | C/G | 6.91E-9 | 214 | 15.07 | 17 | 10.6 | KM Plot |
| KIRP | rs34788973 | chr6:27879200 | C/A | 2.42E-7 | 210 | 15.33 | 15.02 | 9.77 | KM Plot |
| KIRP | rs34822233 | chr10:70676897 | T/C | 6.91E-9 | 214 | 15.07 | 17 | 10.6 | KM Plot |
| KIRP | rs34832585 | chr6:28150878 | C/T | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs34832871 | chr5:176655929 | A/G | 5.41E-7 | 211 | 15.88 | 20.53 | 4.93 | KM Plot |
| KIRP | rs34852548 | chr10:102012036 | C/T | 3.76E-7 | 213 | 15.88 | 19.83 | 5.7 | KM Plot |
| KIRP | rs34869955 | chr10:63423370 | ATCT/A | 0 | 207 | 18.25 | 9 | 3.93 | KM Plot |
| KIRP | rs34871267 | chr6:28364232 | G/A | 2.08E-7 | 211 | 16.43 | 13.6 | 9.77 | KM Plot |
| KIRP | rs34876396 | chr10:63470426 | C/T | 0 | 214 | 18.02 | 6.2 | 3.38 | KM Plot |
| KIRP | rs34878490 | chr6:26370572 | C/T | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs34893377 | chr3:49515972 | T/TA | 0.000395 | 210 | 13.73 | 16.97 | 17.13 | KM Plot |
| KIRP | rs34923871 | chr16:20443446 | G/C | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
| KIRP | rs34961555 | chr6:26199903 | C/T | 2.35E-7 | 212 | 15.07 | 16.73 | 9.77 | KM Plot |
| KIRP | rs34965299 | chr6:27521856 | A/G | 1.97E-7 | 214 | 16.5 | 12 | 9.77 | KM Plot |